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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879547.1_cds_XP_016437216.1_32999
CDS Infomation

[gene=LOC107763257] [db_xref=GeneID:107763257] [protein=pheophytinase, chloroplastic-like] [protein_id=XP_016437216.1] [location=join(103594..103681,103766..103867,103960..104098,104548..104718,105433..105673,106256..106347,106881..107166)] [gbkey=CDS]
Sequence

ATGTCAACTTCTTGTGCCACTGTCAGAACAGAATGCTTGAACTCAGTAGGTAACAGGTTA
GCTGTGCCTGCAAGAATTAATCATTTCAGGGGAAAATGTGAATTGAATAGAAGGAATTTT
GCTTTGAATGGTATTGTTGCTGCTGGAGCTTCAGTTATTACCCCTTCTGTAGTTGCTGAA
ACCTCTAAAGGTCTGGAGAAACTACCATTTAAGCCAGAGGGGTACAACTATTGGACGTGG
CGCGGCCACAAAATTCATTATGTTGTGGAAGGAGAAGGGTTCCCAGTTGTTCTGATTCAT
GGATTTGGTGCTTCAGCTTTTCACTGGAGGTATAACATACCAGAACTGGCTAAAAAATAC
AAGGTTTATGCTGTGGATTTGATAGGATTTGGCTGGAGCGAGAAGGCACTAATAGACTAT
GATGCCTTGGTTTGGAGAGATCAGGTTGTCGACTTCTTGAAGGATATAGTGAAAGAACCG
GCAGTTTTAGTGGGGAACAGTCTTGGAGGATTTACTGCTTTGGTAGCAGCAGCGTCACTC
ACCGGTCAAGTCAAGGGAGTGTCACTACTGAATAGCGCAGGACAGTTTGGGGATGCCAGC
AGTGCAGCTAAAGAAACTGAAGAAACAGCCTTACAGAAACTTATTCTAAAGCCGCTAAAG
GAAATCTTTCAACGTGTATTCCTTGGATTCTTATTCTGGCAAGCCAAGCAACCGGCTCGT
ATTGAATCTGTCCTGAAGAGCGTCTACAAAGATTCTTCAAACGTGGACGATTATCTCATC
AATTCAATTACTAGACCTGCAGATGACCCAAATGCAGGAGAGGTTTATTACCGACTGATG
ACAAGATTCATGTCAAACCAGAGAAAGTATACACTTGATAGTGTGTTGAGACAACTTTCT
TGCCCATTGCTGTTATTATGGGGTGACCTAGACCCTTGGGTTGGTCCTGCCAAGGCCAAC
CGGATTAAGGAGTTCTATCCGAACACAACTGTTGTTAACCTGCAGGCAGGACATTGTCCC
CACGACGAAGTTCCAGAACTAGTGAATAAAGCTCTATTGGATTGGTTGTCAACCACAGTG
ACACCGGCATCTTCTCTTGAAACAGTATCAGAAGTTTAA

Peptide Sequence

PEP ID

XP_016437216.1
PEP Infomation

PREDICTED: pheophytinase, chloroplastic-like [Nicotiana tabacum]
Sequence

MSTSCATVRTECLNSVGNRLAVPARINHFRGKCELNRRNFALNGIVAAGASVITPSVVAE
TSKGLEKLPFKPEGYNYWTWRGHKIHYVVEGEGFPVVLIHGFGASAFHWRYNIPELAKKY
KVYAVDLIGFGWSEKALIDYDALVWRDQVVDFLKDIVKEPAVLVGNSLGGFTALVAAASL
TGQVKGVSLLNSAGQFGDASSAAKETEETALQKLILKPLKEIFQRVFLGFLFWQAKQPAR
IESVLKSVYKDSSNVDDYLINSITRPADDPNAGEVYYRLMTRFMSNQRKYTLDSVLRQLS
CPLLLLWGDLDPWVGPAKANRIKEFYPNTTVVNLQAGHCPHDEVPELVNKALLDWLSTTV
TPASSLETVSEV

Transcript Sequence

Gene sequence data has not been registered.